Unlocking the Potential of Cyclic Peptide Therapeutics: Viva Biotech's Discovery Insights
As the latest session in the ongoing Viva BioInsights webinar series, Medicinal Chemistry for Cyclic Peptide Drug Discovery, featuring Dr.
Cyclic Peptides: Bridging Small Molecules and Biologics
Cyclic peptides are increasingly recognized as an attractive drug modality to tackle traditionally "undruggable" targets. They combine the oral potential of small molecules with the structural advantages of biologics, enabling new approaches for protein–protein interactions and complex receptors. At the same time, they present key challenges: oral bioavailability is not easily achieved, and stability and permeability must be carefully optimized with a clear medicinal chemistry strategy.
Case Studies: From Nature's Insights to Engineered Innovation
Cyclosporine A
As a natural-product immunosuppressant, cyclosporine A illustrates how a highly hydrophobic cyclic peptide can still achieve oral exposure (~30%). Structural studies across solvents and co-crystals reveal environment-dependent conformational switching (open form vs. β-sheet–like closed form; cis/trans amide), offering a mechanistic explanation for its membrane permeability and oral bioavailability. Importantly, increases in in-vitro binding do not necessarily translate into cell activity, and small structural changes can cause large differences in permeability and pharmacokinetics.
MK-0616
In contrast, MK-0616 exemplifies a Medicinal Chemistry approach to develop an oral tri-cyclic peptide drug. After obtaining the linear peptide hit from mRNA display, the development process includes cyclization, early peptide SAR scans (alanine, D-amino acid, N-methylation), side-chain/backbone tuning, and bi-/tri-cyclic designs guided by co-crystal structures, while largely maintaining the macrocycle's binding-competent conformation. Published studies reported that, with Labrasol-enabled oral dosing and statin co-treatment, MK-0616 achieved long half-lives (35–130 h; F% <5%) along with >80% PCSK9 reduction and ~65% LDL-C lowering.
Together, these cases highlight key features of natural orally bioavailable cyclic peptide and how structure-guided design and medicinal chemistry can develop an orally bioavailable cyclic peptide drug.
From Integrated Capabilities to Future Innovation
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Webinar replay: https://youtu.be/bCx6ezGGH-M
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